The Simpson Lab

Links to thesis documents

Chapter1: Tree of Eukaryotes diagram [jpg]

Chapter2: Isolate BoP4.1-Q feeding [avi]
Chapter2: Cultures [xlsx]
Chapter2: PCR methods, primers, sampling locations [xlsx]
Chapters2-4: EM Fix Methods [xlsx]
Chapter2: Rhizaria SSU tree [newick]
Chapter2: global SSU Reference Tree [svg]
Chapter2: global SSU Reference Tree [newick]
Chapter2: summary of environmental sequences survey [tsv]

Chapter3: Meteora SSU tree [png]
Chapter3: Meteora Video1 -- phase contrast of moving cell showing granule behaviour [avi]
Chapter3: Meteora Video2 -- DIC showing movement and granules [avi]

Chapter4: ProtistX 68tax MAM60guidetree [newick]
Chapter4: ProtistX 68tax tree with PMSF support values [newick]
Chapter4: ProtistX SSU-LSU concatenated phylogeny [newick]
Chapter4: ProtistX SSU-LSU concatenated phylogeny [svg]
Chapter4: ProtistX SSU tree [newick]
Chapter4: ProtistX SSU tree [svg]